What is the Neural Link?

The Neural Link is a bi-directional bridge that connects AI agents directly to the Neo.mjs runtime. It lets agents inspect the Scene Graph, component state, event listeners, computed styles, and DOM rectangles, and mutate the running application in real time.

Why is Neo.mjs called an Application Engine instead of a framework?

Neo.mjs maintains persistent application objects in a worker-backed Scene Graph instead of compiling application state away into ephemeral DOM nodes. That architecture enables multi-window orchestration, runtime permutation, and deep AI introspection.

What is Context Engineering?

Context Engineering shapes the information and tool environment around AI agents. Neo.mjs implements it through Knowledge Base, Memory Core, GitHub Workflow, and Neural Link MCP servers for frontier harnesses, plus a File System MCP server for internal Neo.ai.Agent local loops.

What is the Neo.mjs Agent OS?

The Neo.mjs Agent OS is the repository Brain: source code and services for Memory Core, Knowledge Base, Active Hybrid GraphRAG, DreamService, Golden Path synthesis, A2A coordination, and Neural Link tooling.

Neo.mjs - Self-Evolving Software Organism

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11044 refactor(ai): extract ProcessSupervisorService from Orchestrator (#11022)
11043 feat(docs): v13-path.md update post-Round-2 substrate (#11019)
11042 fix(memory-core): add per-recipient broadcast receipts (#11029)
11041 refactor(orchestrator): extract TaskStateService from Orchestrator
11040 feat(docs): add AGENTS.md §15.6 Swarm Topology Anchor (#11030)
11036 feat(docs): codify contributions-over-commits MX primitive (#11027)
11035 feat(skills): create /lead-role skill and progressive disclosure router (#11028)
11034 feat(pull-request): enforce assignee check in Pre-Flight (#11032)
11021 feat(orchestrator): implement 30-day backup rotation and daemon integration (#11018)
11016 refactor(ai): move orchestrator logic into daemon class (#11009)
11015 feat(skill): session-sunset primary-checkout staleness probe (#11013)
11014 refactor(memory-core): retire chromaUnified topology and enforce unified mode (#11011)
11012 feat(docs): ADR-link enrichment for Structural Inventory (#10449 sub-2)
11010 feat(skill): structural-pre-flight discipline gate (#10449 sub-1)
11008 feat(ai): add orchestrator maintenance daemon (#11006)
11007 refactor(ai-services): align Neo classNames with flat SDK locations across M6 servers (#11005)
11004 test(mcp): implement dockerized remote mcp transport integration test (#11003)
11001 refactor(memory-core): migrate services + managers + helpers to flat SDK boundary (#10996)
11000 docs(ai): document deploy compose env-var toggles (#10969)
10999 chore(deps-dev): bump fast-uri from 3.1.0 to 3.1.2
10998 refactor(neural-link): migrate services to flat SDK boundary (#10994)
10997 refactor(github-workflow): migrate services to flat SDK boundary (#10993)
10995 refactor(knowledge-base): migrate KB services to flat SDK boundary (#10991)
10992 feat(agentos): codify post-review pickup discipline (#10970)
10989 chore(integration): explicitly name unified topology matrix in CI (#10950)
10988 fix(ai): replace Claude wake Space seed (#10987)
10985 feat(memory-core): cover backup restore wipe detection (#10949)
10984 feat(integration): finalize OIDC fixture and cross-tenant tests (#10947)
10981 docs(agentos): add MCPServerBaseClass documentation (#10965)
10979 fix(agent): implement crash-safe locking for summarization daemon (#10971)
10978 refactor(memory-core): retire NEO_MC_PRIMARY single-writer gating (#10972)
10977 feat(ai): migrate memory-core/Server to extend BaseServer + beforeToolDispatch hook (#10965)
10976 feat(ai): migrate file-system/Server to extend BaseServer (#10965)
10975 feat(ai): migrate neural-link/Server to extend BaseServer + boot() seam (#10965)
10974 feat(ai): migrate github-workflow/Server to extend BaseServer (#10965)
10973 feat(ai): migrate knowledge-base/Server to extend BaseServer (#10965)
10968 fix(deploy): harden clean checkout bootstrap (#10964)
10967 feat(memory-core): migrate summary sweeps to daemon (#10956)
10966 feat(ai): MCP server common base class scaffold + unit specs (#10965)
10963 feat(ai): v13 Project reconciliation script + observability-only docs (#10961)
10962 fix(test): harden integration skip gates (#10952)
10958 docs(agentos): v13 architectural path strategy document (#10957)
10955 test(integration): verify primary Memory Core lifecycle in deployment fixture (#10948)
10954 feat(memory-core): Piece C periodic safety-net summarization sweep (#10813)
10953 feat(ci): re-add unit suite to matrix post-Bucket-G substrate (#10939)
10943 feat(ci): re-add unit suite to matrix post-bucket-cascade (#10897, #10939)
10940 test(memory-core): migrate to non-destructive clear strategy (#10939)
10933 feat(ci): re-add unit suite to matrix post-bucket-cascade (#10897)
10930 feat(memory-core): healthcheck features.wake observability block (#10783)
10929 test(github-workflow): isolate config template namespace (#10924)
10928 fix(test): bucket G1-G3 skip-guards (#10924)
10927 fix(test): provision integration embeddings (#10917)
10926 feat(test): surface cross-tenant diagnostics (#10917)
10925 fix(mcp): migrate CoalescingEngine tests to multi-server API (#10923)
10922 feat(ci): re-add unit suite to matrix post-bucket-cascade (#10897)
10921 test(ci): add bucket B+D clean-ci skip guards (#10903)
10920 test: fix HeartbeatPropagation test strict uptime assertion (#10918)
10919 test(integration): defer 2 application-spec failures pending investigation (#10917)
10916 fix(mcp): resolve TransportService concurrency and auth config template prefix (#10915)
10914 fix(deploy): switch Chroma healthcheck to bash TCP probe (#10913)
10912 fix(deploy): use python3 binary in Chroma healthcheck (#10911)
10910 test(ci): add bucket c clean-ci skip guards (#10903)
10909 fix(deploy): use python urllib for Chroma healthcheck (curl missing) (#10908)
10907 feat(testing): NEO_TEST_SKIP_CI guard for heavy-SLM + auth specs (#10903)
10906 docs(ai): institutionalize CI/Security check PR audit
10904 fix(deploy): add --ignore-scripts to npm ci in Dockerfile (#10902)
10901 test(integration): cover proxy identity isolation (#10895)
10899 feat(ci): test matrix workflow gating PRs on unit + integration suites (#10897)
10898 test(integration): implement sustained-liveness heartbeat assertion primitive (#10896)
10894 test(mcp): relocate buildScripts/ai specs to right-hemisphere root (#10889)
10893 feat(testing): add Docker MCP healthcheck integration slice (#10805)
10892 feat(ai/buildScripts): template drift detection in initServerConfigs (#10815)
10891 feat(mcp): enrich manage_discussion_comment return payload with comment ID (#10841)
10890 test(ai): Relocate orchestrator specs to canonical right-hemisphere path
10888 feat(skills): institutionalize test location audit in PR reviews (#10887)
10886 feat(ai/restore): bundle-aware restore orchestrator + npm run ai:restore (#10871)
10885 fix(memory-core): use canonical NEO_ prefixes in SessionService specs (#10884)
10883 docs(agentos): add Completion Bias anti-triggers to sunset skill
10880 feat(deploy): shared KB/MC docker artifacts (#10801)
10879 test(mcp/Authorization): align fixture env-vars with #10877 NEO_ rename (#10878)
10877 Prefix Neo-specific env vars with NEO_ across MC, KB, Tier 1 configs
10876 feat(ai/backup): extend bundle-meta + integrity check + mailbox (#10871)
10875 feat(ai): mandate formal github review state in pr-review skill (#10796)
10873 feat(agentos): guard destructive substrate operations (#10845)
10872 feat(ai): institutionalize daily snapshot pipeline retention and observability (#10844)
10870 feat(agentos): mandate A2A notifications for ANY lifecycle event (#10869)
10868 test(memory-core): mock Chroma collections to prevent data wipes (#10867)
10866 chore(deps-dev): bump hono from 4.12.14 to 4.12.18
10865 docs(codex): document harness restart recovery (#10864)
10863 refactor(mcp): EnvConfig priority inversion fix (#10842)
10861 fix(graph): enable foreign_keys pragma for cascade integrity (#10856)
10853 docs(pull-request): map vs world atlas constraints (#10835)
10852 docs(pull-request): document sync_all branch constraint (#10835)
10851 chore(deps): bump ip-address and express-rate-limit
10850 fix(github-workflow): trim sync_all description below 1024 chars (#10834)
10849 fix(ai): remove dead config substrate surfaces (#10825)
10848 docs(agent-os): Reinstate testing skills in AGENTS.md Workflow table
10839 feat(core): Refactor Neo.isEmpty() to use loose equality (#10838)
10836 refactor(config): remove legacy alias fallbacks from DeploymentConfig and EmbeddingProviderConfig (#10823)
10832 docs(ai): add dev branch constraint to sync_all tool description (#10830)

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Frontmatter

title	docs(pull-request): document sync_all branch constraint (#10835)
author	neo-gemini-pro
state	Closed
createdAt	May 7, 2026, 12:52 AM
updatedAt	May 8, 2026, 10:59 PM
closedAt	May 7, 2026, 12:56 AM
mergedAt
branches	`dev` ← `agent/10835-sync-all-branch-constraint`
url	https://github.com/neomjs/neo/pull/10852

Closed

neo-gemini-pro commented on May 7, 2026, 12:52 AM

Authored by Gemini 3.1 Pro (Antigravity). Session 88a6ed3a-b1b9-461a-aaf3-7c9984bd12e7.

Resolves #10835

Documented the sync_all tool's branch constraints in pull-request-workflow.md to prevent feature branch pollution. Explicitly instructs agents to switch to dev before pulling remote changes or pushing manual issue edits.

Evidence: L1 (static config-shape audit) → L1 required (no runtime-verify ACs). No residuals.