What is the Neural Link?

The Neural Link is a bi-directional bridge that connects AI agents directly to the Neo.mjs runtime. It lets agents inspect the Scene Graph, component state, event listeners, computed styles, and DOM rectangles, and mutate the running application in real time.

Why is Neo.mjs called an Application Engine instead of a framework?

Neo.mjs maintains persistent application objects in a worker-backed Scene Graph instead of compiling application state away into ephemeral DOM nodes. That architecture enables multi-window orchestration, runtime permutation, and deep AI introspection.

What is Context Engineering?

Context Engineering shapes the information and tool environment around AI agents. Neo.mjs implements it through Knowledge Base, Memory Core, GitHub Workflow, and Neural Link MCP servers for frontier harnesses, plus a File System MCP server for internal Neo.ai.Agent local loops.

What is the Neo.mjs Agent OS?

The Neo.mjs Agent OS is the repository Brain: source code and services for Memory Core, Knowledge Base, Active Hybrid GraphRAG, DreamService, Golden Path synthesis, A2A coordination, and Neural Link tooling.

Neo.mjs - Self-Evolving Software Organism

Frontmatter

title	docs(ai): consolidate remaining comment cleanup (#11925)
author	neo-gpt
state	Merged
createdAt	Jun 2, 2026, 8:53 AM
updatedAt	Jun 2, 2026, 10:17 AM
closedAt	Jun 2, 2026, 10:17 AM
mergedAt	Jun 2, 2026, 10:17 AM
branches	`dev` ← `codex/11925-consolidated-tail`
url	https://github.com/neomjs/neo/pull/12366

Merged

neo-gpt commented on Jun 2, 2026, 8:53 AM

Refs #11925

Authored by GPT-5.5 (Codex Desktop). Session 019e85e3-5739-7733-8b9b-c53d0baa99c3. FAIR-band: in-band [16/30 — current author count over last 30 merged]

Consolidates the remaining #11925 tail after the fragmentation halt: folds the closed #12365 harness lifecycle cleanup into one PR and removes uncovered durable ticket-comment refs from the GitLab MCP scaffold and common MCP base server comments. No runtime logic, config defaults, env keys, file paths, or import behavior changed.

Evidence: L1 (static comment-archaeology, shorthand, and diff-hygiene checks on modified files) → L1 required (source-comment cleanup with no runtime AC). Residual: #11925 full closeout remains gated on the already-open fragment PRs landing.

Deltas from ticket

Corrects PR granularity after the operator/peer halt: this is a consolidated tail PR, not another per-file singleton.
Uses Refs #11925 rather than Resolves #11925 because the issue's full cleanup set still includes already-open singleton PRs.

Test Evidence

node buildScripts/util/check-ticket-archaeology.mjs /private/tmp/neo-11925-consolidated-tail/ai/scripts/lifecycle/harnessLifecycle.mjs /private/tmp/neo-11925-consolidated-tail/ai/mcp/server/gitlab-workflow/toolService.mjs /private/tmp/neo-11925-consolidated-tail/ai/mcp/server/gitlab-workflow/Server.mjs /private/tmp/neo-11925-consolidated-tail/ai/mcp/server/BaseServer.mjs — passed; 4 files scanned, 0 violations.
node buildScripts/util/check-shorthand.mjs /private/tmp/neo-11925-consolidated-tail/ai/scripts/lifecycle/harnessLifecycle.mjs /private/tmp/neo-11925-consolidated-tail/ai/mcp/server/gitlab-workflow/toolService.mjs /private/tmp/neo-11925-consolidated-tail/ai/mcp/server/gitlab-workflow/Server.mjs /private/tmp/neo-11925-consolidated-tail/ai/mcp/server/BaseServer.mjs — passed; 4 files scanned, 0 violations.
git diff --check — passed.
git diff --cached --check — passed before commit.
git log origin/dev..HEAD --format='%h%x09%s%n%b' — verified no magic close keyword in branch history.

Post-Merge Validation

Re-run the #11925 archaeology sweep after the already-open fragment PRs merge to confirm remaining durable source-comment ticket refs.

Commit

6c75fd9d6 — docs(ai): consolidate remaining comment cleanup (#11925)

Evolution

After the duplicate singleton anti-pattern was caught, #12365 was closed and this branch consolidated the known remaining tail instead of opening another per-file PR.