What is the 'Neural Link'?

The Neural Link is a bi-directional bridge that connects AI agents (like Gemini or Claude) directly to the Neo.mjs runtime. It allows agents to 'see' the application's Scene Graph, inspect component state, verify event listeners, and even mutate the running application in real-time. This turns the application into a 'glass box' for AI, enabling autonomous debugging and feature development.

Why is Neo.mjs called an 'Application Engine' instead of a framework?

Traditional frameworks are general-purpose libraries (like a Toyota) that help you organize code, but they compile away into ephemeral DOM nodes. Neo.mjs is a precision-engineered runtime (like an F1 car), similar to Unreal Engine for games. It maintains a persistent 'Scene Graph' of objects in a separate worker thread. These objects retain their identity, state, and relationships, allowing for advanced capabilities like multi-window orchestration, runtime permutation, and deep AI introspection that are impossible with 'melted plastic' DOM-based frameworks.

What is 'Context Engineering'?

Context Engineering is the practice of curating the environment and information flow for AI agents to maximize their autonomy. In Neo.mjs, this is implemented via three Model Context Protocol (MCP) servers: a Knowledge Base for semantic code understanding, a Memory Core for learning from past sessions, and a GitHub Workflow server for project management. This ecosystem allows agents to work as fully integrated members of the development team.

What is 'Object Permanence' in the context of Neo.mjs?

In Neo.mjs, UI components are persistent JavaScript objects living in the App Worker, not just transient rendering results. This 'Object Permanence' means a component (like a Dashboard) maintains its state (scroll position, user input, internal logic) even if it is detached from the DOM or moved to a different browser window. This is the 'Lego Technic' approach versus the 'Duplo' approach of traditional frameworks.

What is an 'Agent Operating System'?

Neo.mjs v11 introduced the concept of an Agent OS, where the platform itself provides the tools and interfaces for AI agents to operate. It combines a standalone, type-safe AI SDK for autonomous 'Code Execution' with the Neural Link for runtime control. This enables agents to monitor, debug, and heal the application autonomously, effectively acting as an operating system for synthetic intelligence.

How does Neo.mjs handle multi-window applications?

Neo.mjs uses shared web workers to run a single application instance across multiple browser windows. All windows share the same application state and data in real-time. Components can even move between windows while retaining their JavaScript instances. This enables desktop-class experiences like multi-window IDEs, browser-based email clients, and multi-screen control rooms.

What makes Neo.mjs different from React, Angular, or Vue?

Neo.mjs is fundamentally different in its architecture: (1) It uses True Multithreading via web workers to prevent UI jank, (2) It is an AI-Native Application Engine with built-in bridges for AI collaboration, and (3) It treats components as persistent objects in a Scene Graph, enabling native multi-window support and runtime permutation.

Frontmatter

id	8764
title	Refactor buildScripts folder structure
state	Closed
labels	airefactoringbuild
assignees	tobiu
createdAt	Jan 17, 2026, 7:59 PM
updatedAt	Jan 17, 2026, 8:34 PM
githubUrl	https://github.com/neomjs/neo/issues/8764
author	tobiu
commentsCount	1
parentIssue	null
subIssues	[]
subIssuesCompleted	0
subIssuesTotal	0
blockedBy	[]
blocking	[]
closedAt	Jan 17, 2026, 8:34 PM

Refactor buildScripts folder structure

Name: Neo.mjs Application Engine
Author: Neo.mjs

Closed v11.23.0 airefactoringbuild

tobiu commented on Jan 17, 2026, 7:59 PM

We need to restructure the buildScripts/ directory to improve organization and maintainability. Currently, it's a flat list of diverse scripts.

Proposed Structure:

buildScripts/
├── ai/                     # AI related scripts
│   ├── defragChromaDB.mjs
│   ├── downloadKnowledgeBase.mjs
│   ├── migrateMemoryCore.mjs
│   ├── syncKnowledgeBase.mjs
│   └── uploadKnowledgeBase.mjs
├── build/                  # Core build scripts
│   ├── all.mjs             # buildAll.mjs
│   ├── esmodules.mjs       # buildESModules.mjs
│   ├── highlightJs.mjs     # buildHighlightJs.mjs
│   ├── parse5.mjs          # bundleParse5.mjs
│   └── themes.mjs          # buildThemes.mjs
├── create/                 # Scaffolding/Generators
│   ├── addConfig.mjs
│   ├── app.mjs             # createApp.mjs
│   ├── appMinimal.mjs      # createAppMinimal.mjs
│   ├── class.mjs           # createClass.mjs
│   ├── component.mjs       # createComponent.mjs
│   ├── example.mjs         # tools/createExample.mjs
│   └── scss.mjs            # tools/createScss.mjs
├── docs/                   # Documentation generation
│   ├── index/              # Index generators
│   │   ├── labels.mjs      # createLabelIndex.mjs
│   │   ├── release.mjs     # createReleaseIndex.mjs
│   │   └── tickets.mjs     # createTicketIndex.mjs
│   ├── jsdoc-x/            # Existing
│   ├── seo/                # SEO related
│   │   ├── copy.mjs        # copySeoFiles.mjs
│   │   └── generate.mjs    # generateSeoFiles.mjs
│   └── jsdocx.mjs          # generate-docs-json
├── helpers/                # Codemods and helpers
│   ├── addReactiveTags.mjs
│   ├── checkReactiveTags.mjs
│   ├── convertDesignTokens.mjs
│   └── watchThemes.mjs
├── release/                # Release management
│   ├── prepare.mjs         # prepareRelease.mjs
│   ├── publish.mjs         # publishRelease.mjs
├── util/                   # Shared utilities
│   ├── copyFile.mjs
│   ├── copyFolder.mjs
│   ├── minifyFile.mjs
│   ├── Sanitizer.mjs
│   └── ...
└── webpack/                # Webpack configs (unchanged)

Tasks:

Create new folder structure.
Move and rename scripts.
Update internal relative paths and imports in all moved scripts.
Update package.json scripts to point to new locations.
Update buildScripts/README.md.

tobiu added the ai label on Jan 17, 2026, 7:59 PM

tobiu added the refactoring label on Jan 17, 2026, 7:59 PM

tobiu added the build label on Jan 17, 2026, 7:59 PM

tobiu referenced in commit 7e91f74 - "refactor: restructure buildScripts directory (#8764) on Jan 17, 2026, 8:32 PM

tobiu assigned to @tobiu on Jan 17, 2026, 8:33 PM

tobiu Jan 17, 2026, 8:33 PM

Input from Gemini 3 Pro:

✦ I have successfully refactored the buildScripts folder structure as requested.

Changes:

Restructured Directory: Moved scripts into logical subdirectories (ai, build, create, docs, helpers, release, util).

Updated Imports: Fixed all relative path imports within the moved scripts.

Updated package.json: Modified all npm run scripts to point to the new file locations.

Updated Webpack Configs: Adjusted paths in webpack configurations to align with the new structure.

Fixed Webpack Build: Updated webpackExclude patterns in src/worker/App.mjs, src/worker/Task.mjs, and src/worker/Canvas.mjs to specifically exclude the buildScripts directory. This prevents Webpack from attempting to bundle node-only scripts (like those using fs) into the browser-based worker bundles, resolving the "Module not found" errors encountered during the build.

Verification:

The npm run build-all command should now execute successfully without errors related to missing modules or incorrect paths.

Note: I also removed the empty buildScripts/tools directory.

tobiu closed this issue on Jan 17, 2026, 8:34 PM